PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC12G03640.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 317aa    MW: 33647.4 Da    PI: 7.3746
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC12G03640.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_138.42.6e-12166219558
                      CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 
                      kr++r   NR +A rs +RK +++ eLe+kv++L++e ++L  +l  l++ +a+
  OPUNC12G03640.1 166 KRAKRILANRQSAARSKERKIKYTSELERKVQTLQTEATTLSAQLTLLQNYYAT 219
                      9**********************************************9998875 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.8E-14162226IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.151164221IPR004827Basic-leucine zipper domain
PfamPF001704.5E-11166219IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.6E-12166219No hitNo description
SuperFamilySSF579591.41E-11166220No hitNo description
CDDcd147035.04E-24167214No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    Send to blast
MDGRFPLPPA SGGGGGRGHH RRAHSETFLR LPDADLLLDP EGDFSFSDLD FPSLSDDSPA  60
ISDPTPPPPP PMAATAASPS PAPRPPGGAH MRSLSLDTAF FEGFSLQGGG GGGGSGGSGG  120
HKRSGSMDGV NSPFEGESAL SGGLPDYAKK AMPAERIAEL ALIDPKRAKR ILANRQSAAR  180
SKERKIKYTS ELERKVQTLQ TEATTLSAQL TLLQNYYATI RVGIEAPNGL RALNEALREE  240
VQRLKIAAGQ APSMNGNPFN GGLQQQIPPY YTQQQQQQMP YLGGHHAQQR HPSHQQSSSN  300
GGQSLSGQSL NDSMDFM
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK0659950.0AK065995.1 Oryza sativa Japonica Group cDNA clone:J013048G15, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015618202.11e-165PREDICTED: transcription factor VIP1
SwissprotQ9MA751e-56VIP1_ARATH; Transcription factor VIP1
TrEMBLA0A0E0MJY10.0A0A0E0MJY1_ORYPU; Uncharacterized protein
STRINGLOC_Os12g06520.11e-165(Oryza sativa Japonica Group)
STRINGORGLA12G0036800.11e-165(Oryza glaberrima)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP19253892
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G43700.11e-28VIRE2-interacting protein 1